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iccCounts - Intraclass Correlation Coefficient for Count Data

Estimates the intraclass correlation coefficient (ICC) for count data to assess repeatability (intra-methods concordance) and concordance (between-method concordance). In the concordance setting, the ICC is equivalent to the concordance correlation coefficient estimated by variance components. The ICC is estimated using the estimates from generalized linear mixed models. The within-subjects distributions considered are: Poisson; Negative Binomial with additive and proportional extradispersion; Zero-Inflated Poisson; and Zero-Inflated Negative Binomial with additive and proportional extradispersion. The statistical methodology used to estimate the ICC with count data can be found in Carrasco (2010) <doi:10.1111/j.1541-0420.2009.01335.x>.

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2.00 score 10 scripts 230 downloads

cccrm - Concordance Correlation Coefficient for Repeated (and Non-Repeated) Measures

Estimates the Concordance Correlation Coefficient to assess agreement. The scenarios considered are non-repeated measures, non-longitudinal repeated measures (replicates) and longitudinal repeated measures. It also includes the estimation of the one-way intraclass correlation coefficient also known as reliability index. The estimation approaches implemented are variance components and U-statistics approaches. Description of methods can be found in Fleiss (1986) <doi:10.1002/9781118032923> and Carrasco et al. (2013) <doi:10.1016/j.cmpb.2012.09.002>.

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1.81 score 13 scripts 671 downloads

iccCompare - Comparison of Dependent Intraclass Correlation Coefficients

Provides methods for testing the equality of dependent intraclass correlation coefficients (ICCs) estimated using linear mixed-effects models. Several of the implemented approaches are based on the work of Donner and Zou (2002) <doi:10.1111/1467-9884.00324>.

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1.00 score 392 downloads

iccTraj - Estimates the Intraclass Correlation Coefficient for Trajectory Data

Estimates the intraclass correlation coefficient for trajectory data using a matrix of distances between trajectories. The distances implemented are the extended Hausdorff distances (Min et al. 2007) <doi:10.1080/13658810601073315> and the discrete Fréchet distance (Magdy et al. 2015) <doi:10.1109/IntelCIS.2015.7397286>.

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1.00 score 2 scripts 542 downloads