Package: iccCounts 1.1.2
iccCounts: Intraclass Correlation Coefficient for Count Data
Estimates the intraclass correlation coefficient (ICC) for count data to assess repeatability (intra-methods concordance) and concordance (between-method concordance). In the concordance setting, the ICC is equivalent to the concordance correlation coefficient estimated by variance components. The ICC is estimated using the estimates from generalized linear mixed models. The within-subjects distributions considered are: Poisson; Negative Binomial with additive and proportional extradispersion; Zero-Inflated Poisson; and Zero-Inflated Negative Binomial with additive and proportional extradispersion. The statistical methodology used to estimate the ICC with count data can be found in Carrasco (2010) <doi:10.1111/j.1541-0420.2009.01335.x>.
Authors:
iccCounts_1.1.2.tar.gz
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iccCounts_1.1.2.tgz(r-4.4-any)iccCounts_1.1.2.tgz(r-4.3-any)
iccCounts_1.1.2.tar.gz(r-4.5-noble)iccCounts_1.1.2.tar.gz(r-4.4-noble)
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iccCounts.pdf |iccCounts.html✨
iccCounts/json (API)
# Install 'iccCounts' in R: |
install.packages('iccCounts', repos = c('https://jlcarrascoub.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 9 months agofrom:e174b64e0f. Checks:OK: 6 ERROR: 1. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 29 2024 |
R-4.5-win | ERROR | Oct 29 2024 |
R-4.5-linux | OK | Oct 29 2024 |
R-4.4-win | OK | Oct 29 2024 |
R-4.4-mac | OK | Oct 29 2024 |
R-4.3-win | OK | Oct 29 2024 |
R-4.3-mac | OK | Oct 29 2024 |
Exports:DispersionTestGOF_checkICCicc_countsplot_BAVarCompZeroTest
Dependencies:bootclicolorspaceDerivdplyrfansifarvergenericsggplot2glmmTMBgluegridExtragtableisobandlabelinglatticelifecyclelme4magrittrMASSMatrixmgcvminqamunsellnlmenloptrnumDerivpillarpkgconfigR6rbibutilsRColorBrewerRcppRcppEigenRdpackreformulasrlangscalestibbletidyselectTMButf8vctrsVGAMviridisLitewithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
CD34+ count cell data | AF |
Dispersion test for GLMM | DispersionTest |
Sparrow fledglings paternity data | EPP |
Goodness of fit for GLMM | GOF_check |
Tick counts data | Grimso |
Prints the intraclass correlation coefficient | ICC |
Intraclass correlation coefficient (ICC) for count data | icc_counts |
Bland-Altman plot | plot_BA |
Goodness of fit plots | plot.GOF |
GLMM variance components | VarComp |
Zero-Inflation test for GLMM | ZeroTest |