{
  "_id": "6a1d35b31d7bb097a0a3cc88",
  "Package": "iccCounts",
  "Title": "Intraclass Correlation Coefficient for Count Data",
  "Version": "1.1.4",
  "Authors@R": "person(given = c(\"Josep\", \"L.\"),\nfamily = \"Carrasco\",\nrole = c(\"aut\", \"cre\"),\nemail = \"jlcarrasco@ub.edu\")",
  "Maintainer": "Josep L. Carrasco <jlcarrasco@ub.edu>",
  "Description": "Estimates the intraclass correlation coefficient (ICC) for\ncount data to assess repeatability (intra-methods concordance)\nand concordance (between-method concordance). In the\nconcordance setting, the ICC is equivalent to the concordance\ncorrelation coefficient estimated by variance components. The\nICC is estimated using the estimates from generalized linear\nmixed models. The within-subjects distributions considered are:\nPoisson; Negative Binomial with additive and proportional\nextradispersion; Zero-Inflated Poisson; and Zero-Inflated\nNegative Binomial with additive and proportional\nextradispersion. The statistical methodology used to estimate\nthe ICC with count data can be found in Carrasco (2010)\n<doi:10.1111/j.1541-0420.2009.01335.x>.",
  "VignetteBuilder": "knitr",
  "Encoding": "UTF-8",
  "License": "GPL (>= 2)",
  "LazyData": "true",
  "RoxygenNote": "7.3.3",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-01 07:15:06 UTC",
    "User": "root"
  },
  "Author": "Josep L. Carrasco [aut, cre]",
  "Config/pak/sysreqs": "cmake make libicu-dev",
  "Repository": "https://jlcarrascoub.r-universe.dev",
  "Date/Publication": "2026-01-30 13:32:38 UTC",
  "RemoteUrl": "https://github.com/cran/iccCounts",
  "RemoteRef": "HEAD",
  "RemoteSha": "28e11638056d10bb78b211b6013332bde6f940a2",
  "MD5sum": "a5114ee6e06a5012a581b6393668fb9e",
  "_user": "jlcarrascoub",
  "_type": "src",
  "_file": "iccCounts_1.1.4.tar.gz",
  "_fileid": "4a30acff947047be398a13bf5394092da481a9e739817b42bd5f3723dd5eb63b",
  "_filesize": 1159663,
  "_sha256": "4a30acff947047be398a13bf5394092da481a9e739817b42bd5f3723dd5eb63b",
  "_created": "2026-06-01T07:15:06.000Z",
  "_published": "2026-06-01T07:33:07.519Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 78803868084,
      "time": 165,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7325498309"
    },
    {
      "job": 78803868034,
      "time": 173,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7325500077"
    },
    {
      "job": 78803868058,
      "time": 150,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7325739116"
    },
    {
      "job": 78803868042,
      "time": 149,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7325734102"
    },
    {
      "job": 78803159442,
      "time": 340,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7325455302"
    },
    {
      "job": 78803868049,
      "time": 113,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7325484515"
    },
    {
      "job": 78803868167,
      "time": 179,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7325501390"
    },
    {
      "job": 78803868090,
      "time": 125,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7325488122"
    },
    {
      "job": 78803868240,
      "time": 136,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7325490712"
    }
  ],
  "_buildurl": "https://github.com/r-universe/jlcarrascoub/actions/runs/26740494101",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/iccCounts",
  "_commit": {
    "id": "28e11638056d10bb78b211b6013332bde6f940a2",
    "author": "Josep L. Carrasco <jlcarrasco@ub.edu>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 1.1.4\n",
    "time": 1769779958
  },
  "_maintainer": {
    "name": "Josep L. Carrasco",
    "email": "jlcarrasco@ub.edu",
    "login": "jlcarrascoub",
    "description": "",
    "uuid": 79377060
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.0",
      "role": "Depends"
    },
    {
      "package": "glmmTMB",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "Deriv",
      "role": "Imports"
    },
    {
      "package": "gridExtra",
      "role": "Imports"
    },
    {
      "package": "VGAM",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "version": ">= 1.1.0",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-05",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "1.1.4",
      "date": "2026-01-30"
    }
  ],
  "_stars": 0,
  "_contributors": [
    {
      "user": "jlcarrascoub",
      "count": 7,
      "uuid": 79377060
    }
  ],
  "_userbio": {
    "uuid": 79377060,
    "type": "user",
    "name": "jlcarrascoUB"
  },
  "_downloads": {
    "count": 230,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/iccCounts"
  },
  "_searchresults": 10,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/iccCounts.html",
    "manual.pdf"
  ],
  "_realowner": "jlcarrascoub",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0.1",
      "date": "2021-06-01"
    },
    {
      "version": "1.0.2",
      "date": "2021-06-30"
    },
    {
      "version": "1.0.3",
      "date": "2021-07-30"
    },
    {
      "version": "1.1.0",
      "date": "2022-06-03"
    },
    {
      "version": "1.1.1",
      "date": "2022-06-09"
    },
    {
      "version": "1.1.2",
      "date": "2024-02-28"
    },
    {
      "version": "1.1.4",
      "date": "2026-01-30"
    }
  ],
  "_exports": [
    "DispersionTest",
    "GOF_check",
    "ICC",
    "icc_counts",
    "plot_BA",
    "VarComp",
    "ZeroTest"
  ],
  "_datasets": [
    {
      "name": "AF",
      "title": "CD34+ count cell data",
      "object": "data",
      "class": [
        "data.frame"
      ],
      "fields": [
        "y",
        "id",
        "met"
      ],
      "rows": 40,
      "table": true,
      "tojson": true
    },
    {
      "name": "EPP",
      "title": "Sparrow fledglings paternity data",
      "object": "data",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Social",
        "id",
        "Year"
      ],
      "rows": 193,
      "table": true,
      "tojson": true
    },
    {
      "name": "Grimso",
      "title": "Tick counts data",
      "object": "data",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Tot",
        "TransectID",
        "Round"
      ],
      "rows": 520,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "AF",
      "title": "CD34+ count cell data",
      "topics": [
        "AF"
      ]
    },
    {
      "page": "DispersionTest",
      "title": "Dispersion test for GLMM",
      "topics": [
        "DispersionTest"
      ]
    },
    {
      "page": "EPP",
      "title": "Sparrow fledglings paternity data",
      "topics": [
        "EPP"
      ]
    },
    {
      "page": "GOF_check",
      "title": "Goodness of fit for GLMM",
      "topics": [
        "GOF_check"
      ]
    },
    {
      "page": "Grimso",
      "title": "Tick counts data",
      "topics": [
        "Grimso"
      ]
    },
    {
      "page": "ICC",
      "title": "Prints the intraclass correlation coefficient",
      "topics": [
        "ICC"
      ]
    },
    {
      "page": "icc_counts",
      "title": "Intraclass correlation coefficient (ICC) for count data",
      "topics": [
        "icc_counts"
      ]
    },
    {
      "page": "plot_BA",
      "title": "Bland-Altman plot",
      "topics": [
        "plot_BA"
      ]
    },
    {
      "page": "plot.GOF",
      "title": "Goodness of fit plots",
      "topics": [
        "plot.GOF"
      ]
    },
    {
      "page": "VarComp",
      "title": "GLMM variance components",
      "topics": [
        "VarComp"
      ]
    },
    {
      "page": "ZeroTest",
      "title": "Zero-Inflation test for GLMM",
      "topics": [
        "ZeroTest"
      ]
    }
  ],
  "_rundeps": [
    "backports",
    "boot",
    "broom",
    "cli",
    "colorspace",
    "cowplot",
    "cpp11",
    "Deriv",
    "doBy",
    "dplyr",
    "farver",
    "forecast",
    "fracdiff",
    "generics",
    "ggplot2",
    "glmmTMB",
    "glue",
    "gridExtra",
    "gtable",
    "isoband",
    "labeling",
    "lattice",
    "lifecycle",
    "lme4",
    "lmtest",
    "magrittr",
    "MASS",
    "Matrix",
    "mgcv",
    "microbenchmark",
    "minqa",
    "modelr",
    "nlme",
    "nloptr",
    "nnet",
    "numDeriv",
    "pbkrtest",
    "pillar",
    "pkgconfig",
    "purrr",
    "R6",
    "rbibutils",
    "RColorBrewer",
    "Rcpp",
    "RcppArmadillo",
    "RcppEigen",
    "Rdpack",
    "reformulas",
    "rlang",
    "S7",
    "sandwich",
    "scales",
    "stringi",
    "stringr",
    "tibble",
    "tidyr",
    "tidyselect",
    "timeDate",
    "TMB",
    "urca",
    "utf8",
    "vctrs",
    "VGAM",
    "viridisLite",
    "withr",
    "zoo"
  ],
  "_vignettes": [
    {
      "source": "iccCounts_examples.Rmd",
      "filename": "iccCounts_examples.html",
      "title": "Examples of assessment of agreement with count data",
      "author": "Josep L. Carrasco",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Example 1. CD34+ count cell data",
        "Example 2. Tick counts data",
        "Example 3. Sparrow fledglings paternity",
        "References"
      ],
      "created": "2021-06-01 06:40:09",
      "modified": "2026-01-30 13:32:38",
      "commits": 3
    }
  ],
  "_score": 2,
  "_indexed": true,
  "_nocasepkg": "icccounts",
  "_universes": [
    "jlcarrascoub"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.1.4",
      "date": "2026-06-01T07:17:19.000Z",
      "distro": "noble",
      "commit": "28e11638056d10bb78b211b6013332bde6f940a2",
      "fileid": "dbffe2a8eac0c49c39ed513b95241659a21819da626e2a983a48484734685223",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jlcarrascoub/actions/runs/26740494101"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.1.4",
      "date": "2026-06-01T07:17:25.000Z",
      "distro": "noble",
      "commit": "28e11638056d10bb78b211b6013332bde6f940a2",
      "fileid": "5c873638a752d5b824a6c1c74538780701025139f1f6de6f20935eda3fd93bb6",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jlcarrascoub/actions/runs/26740494101"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.1.4",
      "date": "2026-06-01T07:32:02.000Z",
      "commit": "28e11638056d10bb78b211b6013332bde6f940a2",
      "fileid": "5bf0e6eda98a1b914b24bd8585d5503d51121543b7172bae73280f9e8acfcf15",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jlcarrascoub/actions/runs/26740494101"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.1.4",
      "date": "2026-06-01T07:31:44.000Z",
      "commit": "28e11638056d10bb78b211b6013332bde6f940a2",
      "fileid": "e5bf47f8c64c6e508ccbf1fb4acf7365eb52f1eba8db7c9d3d21b489ae9ac8e8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jlcarrascoub/actions/runs/26740494101"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.1.4",
      "date": "2026-06-01T07:17:19.000Z",
      "commit": "28e11638056d10bb78b211b6013332bde6f940a2",
      "fileid": "0338aae4cf3e1a0b3ed305003a7e66a5b5825b6904ebecf98b6b16bf845fb9b1",
      "status": "success",
      "buildurl": "https://github.com/r-universe/jlcarrascoub/actions/runs/26740494101"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.1.4",
      "date": "2026-06-01T07:17:18.000Z",
      "commit": "28e11638056d10bb78b211b6013332bde6f940a2",
      "fileid": "1e535e2f663b2249f7a61c804367b7175a96993e3780f64b34d4ade06fc145d5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jlcarrascoub/actions/runs/26740494101"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.1.4",
      "date": "2026-06-01T07:16:31.000Z",
      "commit": "28e11638056d10bb78b211b6013332bde6f940a2",
      "fileid": "810cf72dfa0eab74d08b284befe261481b785cee4cddac01efd106e4d4cd1f6a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jlcarrascoub/actions/runs/26740494101"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.1.4",
      "date": "2026-06-01T07:16:38.000Z",
      "commit": "28e11638056d10bb78b211b6013332bde6f940a2",
      "fileid": "889e718c74247b141e9b5ea3db34d4748a3311f2ba9e31475aa74cfaf7e80d63",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jlcarrascoub/actions/runs/26740494101"
    }
  ]
}